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English Intern
    Core Unit Systemmedizin

    Publikationen

    Bitte beachten Sie: Veröffentlichungen, Poster oder Präsentationen, die Dienste oder Daten nutzen, die in der Core Unit und von ihren Mitarbeitern gesammelt wurden, sollten diese Beiträge entsprechend auflisten. Vielen Dank.

    [ 2019 ] [ 2018 ] [ 2017 ]

    2019 [ nach oben ]

    • Sensory profiles and immune-related expression patterns of patients with and without neuropathic pain after peripheral nerve lesion. Held, Melissa; Karl, Franziska; Vlckova, Eva; Rajdova, Aneta; Escolano-Lozano, Fabiola; Stetter, Christian; Bharti, Richa; Förstner, Konrad U.; Leinders, Mathias; Duvsek, Ladislav; Birklein, Frank; Bednarik, Josef; Sommer, Claudia; Ücceyler, Nurcan in PAIN (2019). 160(10) 2316--2327.
       
    • RAL GTPases mediate multiple myeloma cell survival and are activated independently of oncogenic RAS. Seibold, Marcel; Stühmer, Thorsten; Kremer, Nadine; Mottok, Anja; Scholz, Claus-Jürgen; Schlosser, Andreas; Leich, Ellen; Holzgrabe, Ulrike; Brünnert, Daniela; Barrio, Santiago; Kortüm, K. Martin; Solimando, Antonio G.; Chatterjee, Manik; Einsele, Hermann; Rosenwald, Andreas; Bargou, Ralf C.; Steinbrunn, Torsten in Haematologica (2019). haematol.2019.223024.
       
    • Hierarchy of mono- and biallelic TP53 alterations in multiple myeloma cell fitness. Munawar, Umair; Rasche, Leo; Müller, Nicole; Vogt, Cornelia; Da-Via, Matteo; Haertle, Larissa; Arampatzi, Panagiota; Dietrich, Sascha; Roth, Markus; Garitano-Trojaola, Andoni; Steinhardt, Maximilian Johannes; Strifler, Susanne; Gallardo, Miguel; Martinez-Lopez, Joaquin; Bargou, Ralf C.; Heckel, Tobias; Einsele, Hermann; Stühmer, Thorsten; Kortüm, K. Martin; Barrio, Santiago in Blood (2019). 134(10) 836--840.
       
    • Time-resolved single-cell transcriptomics uncovers dynamics of cardiac neutrophil diversity in murine myocardial infarction. Vafadarnejad, Ehsan; Rizzo, Giuseppe; Krampert, Laura; Arampatzi, Panagiota; Nugroho, Vallery Audy; Schulz, Dirk; Roesch, Melanie; Alayrac, Paul; Vilar, Jose; Silvestre, Jean-Sébastien; Zernecke, Alma; Saliba, Antoine-Emmanuel; Cochain, Clément in bioRxiv (2019).
       
    • scSLAM-seq reveals core features of transcription dynamics in single cells. Erhard, Florian; Baptista, Marisa A. P.; Krammer, Tobias; Hennig, Thomas; Lange, Marius; Arampatzi, Panagiota; Jürges, Christopher S.; Theis, Fabian J.; Saliba, Antoine-Emmanuel; Dölken, Lars in Nature (2019). 571(7765) 419--423.
       
    • Efficient depletion of ribosomal RNA for RNA sequencing in planarians. Kim, Iana V.; Ross, Eric J.; Dietrich, Sascha; Döring, Kristina; Sánchez Alvarado, Alejandro; Kuhn, Claus-D. in bioRxiv (2019).
       
    • Identification of Cholecystokinin by Genome-Wide Profiling as Potential Mediator of Serotonin-Dependent Behavioral Effects of Maternal Separation in the Amygdala. Weidner, Magdalena T.; Lardenoije, Roy; Eijssen, Lars; Mogavero, Floriana; Groodt, Lilian P. M. T. De; Popp, Sandy; Palme, Rupert; Förstner, Konrad U.; Strekalova, Tatyana; Steinbusch, Harry W. M.; Schmitt-Böhrer, Angelika G.; Glennon, Jeffrey C.; Waider, Jonas; van den Hove, Daniel L. A.; Lesch, Klaus-Peter in Frontiers in Neuroscience (2019). 13
       
    • Contribution of LTi and TH17 cells to B cell aggregate formation in the central nervous system in a mouse model of multiple sclerosis. Schropp, Verena; Rohde, Jörn; Rovituso, Damiano M.; Jabari, Samir; Bharti, Richa; Kuerten, Stefanie in Journal of Neuroinflammation (2019). 16(1) 111.
       
    • Integrative functional genomics decodes herpes simplex virus 1. Whisnant, Adam W.; Jürges, Christopher S.; Hennig, Thomas; Wyler, Emanuel; Prusty, Bhupesh; Rutkowski, Andrzej J; Ltextquoterighthernault, Anne; Göbel, Margarete; Döring, Kristina; Menegatti, Jennifer; Antrobus, Robin; Matheson, Nicholas J.; Künzig, Florian W.H.; Mastrobuoni, Guido; Bielow, Chris; Kempa, Stefan; Chunguang, Liang; Dandekar, Thomas; Zimmer, Ralf; Landthaler, Markus; Grässer, Friedrich; Lehner, Paul J.; Friedel, Caroline C.; Erhard, Florian; Dölken, Lars in bioRxiv (2019).
       
    • Characterization of the transcriptome of Haloferax volcanii, grown under four different conditions, with mixed RNA-Seq. Laass, Sebastian; Monzon, Vivian A.; Kliemt, Jana; Hammelmann, Matthias; Pfeiffer, Friedhelm; Förstner, Konrad U.; Soppa, Jörg in PLOS ONE (2019). 14(4) 1-24.
       
    • Cognate Nonlytic Interactions between CD8+ T Cells and Breast Cancer Cells Induce Cancer Stem Cell–like Properties. Stein, Roland G.; Ebert, Stefan; Schlahsa, Laura; Scholz, Claus J.; Braun, Matthias; Hauck, Petra; Horn, Evi; Monoranu, Camelia-Maria; Thiemann, Vincent J.; Wustrow, Michael P.; Häusler, Sebastian F.; Barrio, Itsaso Montalbán del; Stüber, Tanja N.; Wölfl, Matthias; Dietl, Johannes; Rosenwald, Andreas; Diessner, Joachim E.; Wöckel, Achim; Wischhusen, Jörg in Cancer Research (2019). 79(7) 1507--1519.
       
    • The small non-coding RNA RsaE influences extracellular matrix composition in Staphylococcus epidermidis biofilm communities. Schoenfelder, Sonja M. K.; Lange, Claudia; Prakash, Srinivasa Abishek; Marincola, Gabriella; Lerch, Maike F.; Wencker, Freya D. R.; Förstner, Konrad U.; Sharma, Cynthia M.; Ziebuhr, Wilma in PLOS Pathogens (2019). 15(3) e1007618.
       
    • MicroRNA expression correlates with disease recurrence and overall survival in oral squamous cell carcinoma. Moratin, Julius; Hartmann, Stefan; Brands, Roman C.; Horn, Dominik; Fuchs, Andreas; Mutzbauer, Grit; Seher, Axel; Scholz, Claus; Müller-Richter, Urs D.A.; Linz, Christian in Journal of Cranio-Maxillofacial Surgery (2019). 47(3) 523--529.
       
    • The identification of patient-specific mutations reveals dual pathway activation in most patients with melanoma and activated receptor tyrosine kinases in BRAF/NRAS wild-type melanomas. Appenzeller, Silke; Gesierich, Anja; Thiem, Alexander; Hufnagel, Anita; Jessen, Christina; Kneitz, Hermann; Regensburger, Martina; Schmidt, Cornelia; Zirkenbach, Vanessa; Bischler, Thorsten; Schilling, Bastian; Siedel, Claudia; Goebeler, Maria-Elisabeth; Houben, Roland; Schrama, David; Gehrig, Andrea; Rost, Simone; Maurus, Katja; Bargou, Ralf; Rosenwald, Andreas; Schartl, Manfred; Goebeler, Matthias; Meierjohann, Svenja in Cancer (2019). 125(4) 586--600.
       
    • The Major RNA-Binding Protein ProQ Impacts Virulence Gene Expression in Salmonella enterica Serovar Typhimurium. Westermann, Alexander J.; Venturini, Elisa; Sellin, Mikael E.; Förstner, Konrad U.; Hardt, Wolf-Dietrich; Vogel, Jörg in mBio (2019). 10(1) e02504--18.
       

    2018 [ nach oben ]

    • Post-transcriptional gene regulation by an Hfq-independent small RNA in Caulobacter crescentus. Fröhlich, Kathrin S.; Förstner, Konrad U.; Gitai, Zemer in Nucleic Acids Research (2018). 46(20) 10969--10982.
       
    • Clinical implications of fracture-associated vascular damage in extremity and pelvic trauma. Gilbert, F.; Schneemann, C.; Scholz, C. J.; Kickuth, R.; Meffert, R. H.; Wildenauer, R.; Lorenz, U.; Kellersmann, R.; Busch, A. in BMC Musculoskeletal Disorders (2018). 19(1) 404.
       
    • Genome organization and DNA accessibility control antigenic variation in trypanosomes. Müller, Laura S. M.; Cosentino, Raúl O.; Förstner, Konrad U.; Guizetti, Julien; Wedel, Carolin; Kaplan, Noam; Janzen, Christian J.; Arampatzi, Panagiota; Vogel, Jörg; Steinbiss, Sascha; Otto, Thomas D.; Saliba, Antoine-Emmanuel; Sebra, Robert P.; Siegel, T. Nicolai in Nature (2018). 563(7729) 121--125.
       
    • Neonatally imprinted stromal cell subsets induce tolerogenic dendritic cells in mesenteric lymph nodes. Pezoldt, Joern; Pasztoi, Maria; Zou, Mangge; Wiechers, Carolin; Beckstette, Michael; Thierry, Guilhem R.; Vafadarnejad, Ehsan; Floess, Stefan; Arampatzi, Panagiota; Buettner, Manuela; Schweer, Janina; Fleissner, Diana; Vital, Marius; Pieper, Dietmar H.; Basic, Marijana; Dersch, Petra; Strowig, Till; Hornef, Mathias; Bleich, André; Bode, Ulrike; Pabst, Oliver; Bajénoff, Marc; Saliba, Antoine-Emmanuel; Huehn, Jochen in Nature Communications (2018). 9(1)
       
    • RNase E cleavage shapes the transcriptome of Rhodobacter sphaeroides and strongly impacts phototrophic growth. Förstner, Konrad U.; Reuscher, Carina M.; Haberzettl, Kerstin; Weber, Lennart; Klug, Gabriele in Life Science Alliance (2018). 1(4) e201800080.
       
    • Panel Sequencing Shows Recurrent Genetic FAS Alterations in Primary Cutaneous Marginal Zone Lymphoma. Maurus, Katja; Appenzeller, Silke; Roth, Sabine; Kuper, Jochen; Rost, Simone; Meierjohann, Svenja; Arampatzi, Panagiota; Goebeler, Matthias; Rosenwald, Andreas; Geissinger, Eva; Wobser, Marion in Journal of Investigative Dermatology (2018). 138(7) 1573--1581.
       
    • A New Bioactive Compound From the Marine Sponge-Derived Streptomyces sp. SBT348 Inhibits Staphylococcal Growth and Biofilm Formation. Balasubramanian, Srikkanth; Skaf, Joseph; Holzgrabe, Ulrike; Bharti, Richa; Förstner, Konrad U.; Ziebuhr, Wilma; Humeida, Ute H.; Abdelmohsen, Usama R.; Oelschlaeger, Tobias A. in Frontiers in Microbiology (2018). 9
       
    • Global Maps of ProQ Binding In Vivo Reveal Target Recognition via RNA Structure and Stability Control at mRNA 3′ Ends. Holmqvist, Erik; Li, Lei; Bischler, Thorsten; Barquist, Lars; Vogel, Jörg in Molecular Cell (2018). 70(5) 971--982.e6.
       
    • The Probiotic Escherichia coli Strain Nissle 1917 Combats Lambdoid Bacteriophages stx and λ. Bury, Susanne; Soundararajan, Manonmani; Bharti, Richa; von Bünau, Rudolf; Förstner, Konrad U.; Oelschlaeger, Tobias A. in Frontiers in Microbiology (2018). 9
       
    • CRISPR RNA-Dependent Binding and Cleavage of Endogenous RNAs by the Campylobacter jejuni Cas9. Dugar, Gaurav; Leenay, Ryan T.; Eisenbart, Sara K.; Bischler, Thorsten; Aul, Belinda U.; Beisel, Chase L.; Sharma, Cynthia M. in Molecular Cell (2018). 69(5) 893--905.e7.
       
    • Computational Analysis of RNA–Protein Interactions via Deep Sequencing. Li, Lei; Förstner, Konrad U.; Chao, Yanjie in Transcriptome Data Analysis (2018). 171--182.
       
    • Single-Cell RNA-Seq Reveals the Transcriptional Landscape and Heterogeneity of Aortic Macrophages in Murine Atherosclerosis. Cochain, Clément; Vafadarnejad, Ehsan; Arampatzi, Panagiota; Jaroslav, Pelisek; Winkels, Holger; Ley, Klaus; Wolf, Dennis; Saliba, Antoine-Emmanuel; Zernecke, Alma in Circulation Research (2018). CIRCRESAHA.117.312509.
       
    • hnRNP R and its main interactor, the noncoding RNA 7SK, coregulate the axonal transcriptome of motoneurons. Briese, Michael; Saal-Bauernschubert, Lena; Ji, Changhe; Moradi, Mehri; Ghanawi, Hanaa; Uhl, Michael; Appenzeller, Silke; Backofen, Rolf; Sendtner, Michael in Proceedings of the National Academy of Sciences (2018). 115(12) E2859--E2868.
       
    • A Novel Mechanism of Inactivating Antibacterial Nitro Compounds in the Human Pathogen Staphylococcus aureus by Overexpression of a NADH-Dependent Flavin Nitroreductase. El-Hossary, Ebaa M.; Förstner, Konrad U.; François, Patrice; Baud, Damien; Streker, Karin; Schrenzel, Jacques; Ohlsen, Knut; Holzgrabe, Ulrike in Antimicrobial Agents and Chemotherapy (2018). 62(2) e01510--17.
       
    • Explorative results from multistep screening for potential genetic risk loci of Alzheimer's disease in the longitudinal VITA study cohort. Scholz, Claus-Jürgen; Weber, Heike; Jungwirth, Susanne; Danielczyk, Walter; Reif, Andreas; Tragl, Karl-Heinz; Fischer, Peter; Riederer, Peter; Deckert, Jürgen; Grünblatt, Edna in Journal of Neural Transmission (2018). 125(1) 77--87.
       

    2017 [ nach oben ]

    • sRNA154 a newly identified regulator of nitrogen fixation in Methanosarcina mazei strain Gö1. Prasse, Daniela; Förstner, Konrad U.; Jäger, Dominik; Backofen, Rolf; Schmitz, Ruth A. in RNA Biology (2017). 14(11) 1544--1558.
       
    • Genetic Overlap Between Attention-Deficit/Hyperactivity Disorder and Bipolar Disorder: Evidence From Genome-wide Association Study Meta-analysis. van Hulzen, Kimm J.E.; Scholz, Claus J.; Franke, Barbara; Ripke, Stephan; Klein, Marieke; McQuillin, Andrew; Sonuga-Barke, Edmund J.; Kelsoe, John R.; Landén, Mikael; Andreassen, Ole A.; Lesch, Klaus-Peter; Weber, Heike; Faraone, Stephen V.; Arias-Vasquez, Alejandro; Reif, Andreas in Biological Psychiatry (2017). 82(9) 634--641.
       
    • Insights into Microalga and Bacteria Interactions of Selected Phycosphere Biofilms Using Metagenomic, Transcriptomic, and Proteomic Approaches. Krohn-Molt, Ines; Alawi, Malik; Förstner, Konrad U.; Wiegandt, Alena; Burkhardt, Lia; Indenbirken, Daniela; Thieß, Melanie; Grundhoff, Adam; Kehr, Julia; Tholey, Andreas; Streit, Wolfgang R. in Frontiers in Microbiology (2017). 8
       
    • Insights into Microalga and Bacteria Interactions of Selected Phycosphere Biofilms Using Metagenomic, Transcriptomic, and Proteomic Approaches. Krohn-Molt, Ines; Alawi, Malik; Förstner, Konrad U.; Wiegandt, Alena; Burkhardt, Lia; Indenbirken, Daniela; Thieß, Melanie; Grundhoff, Adam; Kehr, Julia; Tholey, Andreas; Streit, Wolfgang R. in Frontiers in Microbiology (2017). 8
       
    • GT‐rich promoters can drive RNA pol II transcription and deposition of H2A.Z in African trypanosomes. Wedel, Carolin; Förstner, Konrad U.; Derr, Ramona; Siegel, T. Nicolai in The EMBO Journal (2017). 36(17) 2581--2594.
       
    • Hypermethylation of the non-imprinted maternal MEG3 and paternal MEST alleles is highly variable among normal individuals. Haertle, Larissa; Maierhofer, Anna; Böck, Julia; Lehnen, Harald; Böttcher, Yvonne; Blüher, Matthias; Schorsch, Martin; Potabattula, Ramya; El Hajj, Nady; Appenzeller, Silke; Haaf, Thomas in PLOS ONE (2017). 12(8) 1-16.
       
    • The enteric nervous system is a potential autoimmune target in multiple sclerosis. Wunsch, Marie; Jabari, Samir; Voussen, Barbara; Enders, Michael; Srinivasan, Shanthi; Cossais, François; Wedel, Thilo; Boettner, Martina; Schwarz, Anna; Weyer, Linda; Göcer, Oktay; Schroeter, Michael; Maeurer, Mathias; Woenckhaus, Matthias; Pollok, Karolin; Radbruch, Helena; Klotz, Luisa; Scholz, Claus-Jürgen; Nickel, Joachim; Friebe, Andreas; Addicks, Klaus; Ergün, Süleyman; Lehmann, Paul V.; Kuerten, Stefanie in Acta Neuropathologica (2017). 134(2) 281--295.
       
    • The regulation of tetraspanin 8 gene expression—A potential new mechanism in the pathogenesis of bipolar disorder. Schartner, Christoph; Scholz, Claus-Jürgen; Weber, Heike; Post, Antonia; Freudenberg, Florian; Grünewald, Lena; Reif, Andreas in American Journal of Medical Genetics Part B: Neuropsychiatric Genetics (2017). 174(7) 740--750.
       
    • The glucocorticoid receptor in monocyte-derived macrophages is critical for cardiac infarct repair and remodeling. Galuppo, Paolo; Vettorazzi, Sabine; Hövelmann, Julian; Scholz, Claus-Jürgen; Tuckermann, Jan Peter; Bauersachs, Johann; Fraccarollo, Daniela in The FASEB Journal (2017). 31(11) 5122--5132.
       
    • An RpoHI-Dependent Response Promotes Outgrowth after Extended Stationary Phase in the Alphaproteobacterium Rhodobacter sphaeroides. Remes, B.; Rische-Grahl, T.; Müller, K. M. H.; Förstner, K. U.; Yu, Sung-Huan; Weber, L.; Jäger, A.; Peuser, V.; Klug, G. in Journal of Bacteriology (2017). 199(14) e00249--17.
       
    • Differential effects of FTY720 on the B cell compartment in a mouse model of multiple sclerosis. Bail, Kathrin; Notz, Quirin; Rovituso, Damiano M.; Schampel, Andrea; Wunsch, Marie; Koeniger, Tobias; Schropp, Verena; Bharti, Richa; Scholz, Claus-Juergen; Foerstner, Konrad U.; Kleinschnitz, Christoph; Kuerten, Stefanie in Journal of Neuroinflammation (2017). 14 148.
       
    • dRNA-seq transcriptional profiling of the FK506 biosynthetic gene cluster in Streptomyces tsukubaensis NRRL18488 and general analysis of the transcriptome. Bauer, Judith S.; Fillinger, Sven; Förstner, Konrad; Herbig, Alexander; Jones, Adam C.; Flinspach, Katrin; Sharma, Cynthia; Gross, Harald; Nieselt, Kay; Apel, Alexander K. in RNA Biology (2017). 14(11) 1617--1626.
       
    • APRICOT: an integrated computational pipeline for the sequence-based identification and characterization of RNA-binding proteins. Sharan, Malvika; Förstner, Konrad U.; Eulalio, Ana; Vogel, Jörg in Nucleic Acids Research (2017). 45(11) e96--e96.
       
    • Pan-Raf co-operates with PI3K-dependent signalling and critically contributes to myeloma cell survival independently of mutated RAS. Müller, E.; Bauer, S.; Stühmer, T.; Mottok, A.; Scholz, C.-J.; Steinbrunn, T.; Brünnert, D.; Brandl, A.; Schraud, H.; Kreßmann, S.; Beilhack, A.; Rosenwald, A.; Bargou, R. C.; Chatterjee, M. in Leukemia (2017). 31(4) 922--933.
       
    • Nimodipine fosters remyelination in a mouse model of multiple sclerosis and induces microglia-specific apoptosis. Schampel, Andrea; Volovitch, Oleg; Koeniger, Tobias; Scholz, Claus-Jürgen; Jörg, Stefanie; Linker, Ralf A.; Wischmeyer, Erhard; Wunsch, Marie; Hell, Johannes W.; Ergün, Süleyman; Kuerten, Stefanie in Proceedings of the National Academy of Sciences (2017). 114(16) E3295--E3304.
       
    • Transcription Profiling of Bacillus subtilis Cells Infected with AR9, a Giant Phage Encoding Two Multisubunit RNA Polymerases. Lavysh, Daria; Sokolova, Maria; Slashcheva, Marina; Förstner, Konrad U.; Severinov, Konstantin in mBio (2017). 8(1) e02041--16.
       
    • In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways. Chao, Yanjie; Li, Lei; Girodat, Dylan; Förstner, Konrad U.; Said, Nelly; Corcoran, Colin; Śmiga, Michał; Papenfort, Kai; Reinhardt, Richard; Wieden, Hans-Joachim; Luisi, Ben F.; Vogel, Jörg in Molecular Cell (2017). 65(1) 39--51.